Synthetic Neurobiology Group

Ed Boyden, Ph.D., Principal Investigator

  • Home
  • Projects
  • People
  • Publications
  • Resources
  • News
  • Classes
  • Videos
  • Contact

People

Principal Investigator

  • Ed Boyden

Administration

  • Macey Lavoie

  • Lisa Lieberson

  • Doug Weston

  • Fira Zainal

Students Postdocs and Research Staff

  • Bobae An

  • Jenna Aronson

  • Nick Barry

  • Shahar Bracha

  • Orhan Celiker

  • Alexis Cho

  • Jaebin Choi

  • Alexi Choueiri

  • Yi Cui

  • Catherine Della Santina

  • Sarah Dohadwala

  • Amauche Emenari

  • Daniel Estandian

  • Rui Gao

  • Miles George

  • Dan Goodwin

  • Kettner Griswold

  • Burcu Guner-Ataman

  • Nathan Han

  • Jordan Harrod

  • Brennan Jackson

  • Shannon Johnson

  • Jinyoung Kang

  • Irena King

  • Kylie Leung

  • Changyang Linghu

  • Yixi Liu

  • Sadhana Lolla

  • Yangning Lu

  • Abigail Mauermann

  • Mitch Murdock

  • Hao Ni

  • Ezinne Oguguo

  • Daniel Oran

  • Danielle Orozco Cosio

  • Shubhra Pandit

  • Demian Park

  • Andrew Payne

  • Zhuyu Peng

  • Brett Pryor

  • Yong Qian

  • Paul Reginato

  • Cipriano Romero

  • Margaret Schroeder

  • Sarah Sclarsic

  • Matt Sears

  • Seung Hyeon Shim

  • Tay Shin

  • Nava Shmoel David

  • Anubhav Sinha

  • Michael Skuhersky

  • Madison Sneve

  • Corban Swain

  • Panos Symvoulidis

  • Giovanni Talei Franzesi

  • Kat Titterton

  • Cristina Torres Caban

  • Shiwei Wang

  • Zeguan Wang

  • Aimei Yang

  • Gaojie Yang

  • Chi Zhang

  • Ruihan Zhang

  • Jian-Ping Zhao

Visiting Scientists and Affiliates

  • Yosuke (Bandy) Bando

  • Emma Towlson

Alumni - Graduate Students Postdocs and Research Staff

  • Leah Acker

  • Kate Adamala

  • Brian Allen

  • Shahar Alon

  • Scott Arfin

  • Shoh Asano

  • Michael Baratta

  • Barbara Barry

  • Steve Bates

  • Moshe Ben-Ezra

  • Jake Bernstein

  • Tim Buschman

  • Jae-Byum Chang

  • Jeremy Chang

  • Fei Chen

  • Yongku Cho

  • Brian Chow

  • Amy Chuong

  • Peilun Dai

  • Desiree Dudley

  • Fahim Farzadfard

  • Jenny Fehring

  • Limor Freifeld

  • Beatriz Goncalves

  • Nir Grossman

  • Alexander Guerra

  • Ishan Gupta

  • Xue Han

  • Mike Henninger

  • Byron Hsu

  • Grace Huynh

  • Erica Jung

  • Louis (Jeong Seuk) Kang

  • Manos Karagiannis

  • Monique Kauke

  • Justin Kinney

  • Kristina Kitko

  • Nathan Klapoetke

  • Suhasa Kodandaramaiah

  • Mingjie Li

  • Charlotte Luff

  • Adam Marblestone

  • Daniel Martin-Alarcon

  • Azadeh Moini

  • Caroline Moore-Kochlacs

  • Masaaki Ogawa

  • Nikita Pak

  • Kiryl Piatkevich

  • Archana Podury

  • Xiaofeng Qian

  • Sam Rodriques

  • David Rolnick

  • Deblina Sarkar

  • Nick Savidis

  • Daniel Schmidt

  • Jorg Scholvin

  • Or Shemesh

  • Annabelle Singer

  • Harbi Sohal

  • Ho-Jun Suk

  • Paul Tillberg

  • Ash Turza

  • Ru Wang

  • Asmamaw (Oz) Wassie

  • Ingrid van Welie

  • Christian Wentz

  • Ian Wickersham

  • Guangyu Xu

  • Young Gyu Yoon

  • Fumi Yoshida

  • Jay (Chih-Chieh) Yu

  • Yongxin Zhao

  • Anthony Zorzos

Alumni - Visiting Scientists and Affiliates

  • Gary Brenner

  • David Dalrymple

  • Joel Dapello

  • Jun Deguchi

  • August Dietrich

  • Ophir Gaathon

  • Alik (Albert) Gerovitch

  • Vinay Gidwaney

  • Charlotte Gopinath

  • Nate Greenslit

  • Sinan Guven

  • Kosuke Katano

  • Kyungman Kim

  • Richie Kohman

  • Ilya Kolb

  • Albert Kwon

  • Philip Low

  • Nikita Obidin

  • Kris Payer

  • Eve Phillips

  • Maryann Rui

  • David Segar

  • Jeannie Stamberger

  • Zachary Steinberg

  • Al Strelzoff

  • Pablo Valdes Quevedo

  • Sarah Wertheimer

  • Alex Wissner-Gross

  • Masahiro Yamaguchi

  • Jiamin Zhuo

Alumni - Undergraduate Researchers

  • Gilberto Abram

  • Jose Aceves

  • Theodore Addo

  • Deniz Aksel

  • Claire Ahn

  • Zack Anderson

  • Bettina Arkhurst

  • Fadi Atieh

  • Siranush Babakhanova

  • Bara Badwan

  • Rachel Bandler

  • Daniel Barabasi

  • Sean Batir

  • Smita Bhattacharjee

  • Denis Bozic

  • Kaia Carioli

  • Stephanie Chan

  • Hannah Chen

  • Linlin Chen

  • Alexander Clifton

  • Emma Costa

  • Malamo Countouris

  • Cortni Dick

  • Huayu Ding

  • Allison Dobry

  • Nico Enriquez

  • Ayomide (Ayo) Fatunde

  • Gabriel Fouasnon

  • Dhruv Garg

  • Malik George

  • Skylar Gordon

  • Jonathan Gootenberg

  • Dana Gretton

  • Katriona Guthrie-Honea

  • Courtney (Drew) Hilliard

  • Jessica Keenan

  • Grigory Khimulya

  • Margaret Kim

  • Eva Klinman

  • Emily Ko

  • Shreya Kochar

  • Sam Langer

  • Cecile Leclerc

  • Amin Lim

  • Leanne Lin

  • Pei-Ann Lin

  • Zixi Liu

  • Oliver MacNeely

  • Ruben Madrigal

  • Sonya Makhni

  • Anais Marenco

  • Ekavali Mishra

  • Tania Morimoto

  • Ellena Popova

  • Cinjon Resnick

  • Semon Rezchikov

  • Alex Rodriguez

  • Jessica Schirmer

  • Sunanda Sharma

  • Zoe Sheinkopf

  • Shirin Shivaei

  • Ester Shmulyian

  • Denzil Sikka

  • Ashutosh Singhal

  • Jon Spaulding

  • Jenna Sternberg

  • Eli Stickgold

  • William Stockton

  • Jerzy Szablowski

  • Augusto Tentori

  • Lia Tian

  • Melina Tsitsiklis

  • Kayla Vodenhal

  • Max von Franque

  • Victoria Wang

  • Rachel Weissman

  • Jeremy Wohlwend

  • Evelyn Wong

  • Eunice Wu

  • Andrew Xue

  • Chun-Chen Yao

  • Anika Yasmin

  • Rin Yunis

Home » People » Alumni - Graduate Students Postdocs and Research Staff » Yongxin Zhao

Yongxin Zhao

Yongxin (Leon) received his BSc in Sun Yat-sen University in China. He then joined the Department of Chemistry in University of Alberta, Canada, and worked on development of directed evolution approaches for improved genetically encoded fluorescent calcium ion and voltage indicators for his PhD. He is the main inventor of GECO and QuasAr families of neural imaging tools. In the Synthetic Neurobiology group, he developed expansion pathology (ExPath). He then went on to start as an assistant professor at Carnegie Mellon University.

Publications

  • Bucur O*, Fu F*, Calderon M, Mylvaganam GH, Ly NL, Day J, Watkin S, Walker BD, Boyden ES**, Zhao Y** (2020) Nanoscale imaging of clinical specimens using conventional and rapid expansion pathology, Nature Protocols 15:1649-1672. (*, equal contribution, **, co-corresponding)

  • Ruixuan Gao*, Shoh M. Asano*, Srigokul Upadhyayula*, Igor Pisarev, Daniel E. Milkie, Tsung-Li Liu, Ved Singh, Austin Graves, Grace H. Huynh, Yongxin Zhao, John Bogovic, Jennifer Colonell, Carolyn M. Ott, Christopher Zugates, Susan Tappan, Alfredo Rodriguez, Kishore R. Mosaliganti, Shu-Hsien Sheu, H. Amalia Pasolli, Song Pang, C. Shan Xu, Sean G. Megason, Harald Hess, Jennifer Lippincott-Schwartz, Adam Hantman, Gerald M. Rubin, Tom Kirchhausen, Stephan Saalfeld, Yoshinori Aso, Edward S. Boyden**, Eric Betzig** (2019) Cortical column and whole-brain imaging with molecular contrast and nanoscale resolution, Science 363(6424):eaau8302. (*, equal contribution, **, co-corresponding)

  • Wassie AT*, Zhao Y*, Boyden ES (2019) Expansion microscopy: principles and uses in biological research, Nature Methods 16(1):33-41. (*, equal contributors)

  • Zhao Y*, Bucur O*, Irshad H, Chen F, Weins A, Stancu AL, Oh EY, DiStasio M, Torous V, Glass B, Stillman IE, Schnitt SJ, Beck AH**, Boyden ES** (2017) Nanoscale imaging of clinical specimens using pathology-optimized expansion microscopy, Nature Biotechnology 35(8):757-764. (*, co-first authors; **, co-corresponding authors)

  • Tillberg, P.W.*, Chen, F.*, Piatkevich, K.D., Zhao, Y., Yu, C.-C., English, B.P., Gao, L., Martorell, A., Suk, H.-J., Yoshida, F., DeGennaro, E.M., Roossien, D.H., Gong, G., Seneviratne, U., Tannenbaum, S.R., Desimone, R., Cai, D., Boyden, E.S. (2016) Protein-retention expansion microscopy of cells and tissues labeled using standard fluorescent proteins and antibodies, Nature Biotechnology 34:987-992. (*, co-first authors)

Copyright 2006-present, Ed Boyden | Accessibility